The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.
The unique characteristics of the Insight Journal include:
- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
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The unique characteristics of the Insight Journal include:
- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
Subscribe to the Kitware's newsletter
to receive news about open-source on your desk, it's free!
Mattes’ Mutual Information Metric for Multimodality Registration of DESS and T2 Mapped Knee Articular MR Sequences
Published in The Insight Journal
Published in The Insight Journal
Registration of multiple MR sequences remains a challenging problem. The Insight Toolkit (ITK) implements the Mattes’ mutual information metric for multimodality registration. Here, example source code, data, and executable files to implement the Mattes’ [...]
This document describes the workflow for unwarping structural MR images, in particular T1-weighted SPGR and MP-RAGE scans, using reference scans of the Magphan(R) EMR051 Quantitative Imaging Phantom (a.k.a. ADNI Phantom) and the tools of the Computational [...]
Skull-stripping (or brain extraction) is an important pre-processing step in neuroimage analysis. This document describes a skull-stripping filter implemented using the Insight Toolkit ITK, which we named itk::StripTsImageFilter. It is a composite filter [...]
HyperFlow and ITK v4 Integration: Exploring the use of a modern parallel dataflow architecture in ITK
Published in The Insight Journal
Published in The Insight Journal
In this document, we report our activities on the subcontract with Kitware where we carefully study the upcoming ITK v4 pipeline design to help the ITK v4 development team to add support of modern dataflow architectures to ITK.
This paper describes the implementation of the LDFFD and TDFFD algorithms. Both quantify motion and deformation from an input image sequence by taking profit of the temporal dimension of velocity fields in the diffeomorphic registration framework to process [...]
Efficient N-Dimensional surface estimation using Crofton formula and run-length encoding
Published in The Insight Journal
Published in The Insight Journal
Unlike the measure of the area in 2D or of the volume in 3D, the perimeter and the surface are not easily measurable in a discretized image.
In this article we describe a method based on the Crofton formula to measure those two parameters in a discritized [...]
This document describes the implementation in ITK of the Straight Walk in a Triangulation algorithm proposed by Devillers et al. Using the exact discrete geometrical orientation predicate, and the itk::QuadEdgeMesh API of ITK, we propose an efficient [...]
This document describes a contribution to the Insight Toolkit intended to perform landmark-based registration on two meshes. The method implemented here is restricted to meshes with a spherical geometry and topology. Please refer Wahba's paper for the [...]
This document describes the implementation using the Insight Toolkit of an algorithm for detecting creases (ridges and valleys) in N-dimensional images, based on the Local Structure Tensor of the image. In addition to the filter used to calculate the [...]
The recent ITKv4 refactoring includes several enhancements to the existing registration framework. These additional transform classes provide access to mappings described by dense displacement fields and their corresponding optimization which complement the [...]
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Journals
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Publication of the Month
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| A Skull-Stripping Filter for ITK
by Bauer S., Fejes T., Reyes M.
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Issues Accepting Submissions
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| Systems and Architectures for Computer Assisted Interventions 2012 18 days |
| 2012 January-June 42 days |
| 2012 January-December Submissions 226 days |
| Computational Algorithms 2963 days |
| Medical Imaging and Computing 6298 days |
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Most Recent Reviews
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| IJ to the rescue, again! Efficient N-Dimensional surface... by Nick Tustison on 2012-03-09 08:55:32
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| Mr Interactive Correspondence Selection by Sanusi A.i on 2012-02-07 02:53:44
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| Towards an open-source pipeline for... Towards an open-source pipeline for... by Cartik Sharma on 2012-01-23 02:04:37
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| Useful structure tensor and creasness... Multilocal Creaseness Measure by Dženan Zukić on 2012-01-16 08:42:23
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| A Wavefront OBJ Writer for VTK A Wavefront OBJ Writer for VTK by Johny daniel Rosero herrera on 2011-12-19 23:12:06
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| Error: Eigenvectors of the structure... Implementation of local structure... by Adriënne Mendrik on 2011-12-09 06:20:22
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